STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prps1Phosphoribosyl pyrophosphate synthetase 1B. (318 aa)    
Predicted Functional Partners:
rbks
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 0.956
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
  
 
 0.951
ppat
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.948
pgm2
Phosphoglucomutase 2.
  
 0.947
LOC103362814
Transketolase b.
   
 
 0.943
TKT
Transketolase.
   
 
 0.943
LOC103359635
Transketolase a.
   
 
 0.943
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.940
umps
Uridine monophosphate synthetase.
  
 
 0.926
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
  
0.914
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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