STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnna2Catenin (cadherin-associated protein), alpha 2. (905 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.981
LOC103369010
Vinculin a.
    
0.975
vcl
Vinculin b.
    
0.975
LOC103371495
Uncharacterized protein.
   
 0.966
afdn
Afadin, adherens junction formation factor a.
    
 0.934
LOC103359947
Actinin, alpha 1.
   
 0.917
ACTN4
Actinin alpha 4.
   
 0.917
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.910
actb
Uncharacterized protein.
    
 0.909
LOC103359554
Uncharacterized protein.
   
 0.898
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.