STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mief1Mitochondrial elongation factor 1. (479 aa)    
Predicted Functional Partners:
thrsp
Thyroid hormone responsive.
    
  0.704
sting1
Transmembrane protein 173.
    
 0.641
LOC103355532
IFI30 lysosomal thiol reductase.
    
  0.593
fam166a
Uncharacterized protein.
    
  0.593
LOC103360791
Si:dkey-197i20.6.
    
  0.593
LOC103358545
Activating transcription factor 4b.
      
 0.487
asrgl1
Asparaginase like 1.
      
 0.482
ENSSPAP00000024582
Uncharacterized protein.
      
 0.482
il2rb
Fibronectin type-III domain-containing protein.
      
 0.465
LOC103358892
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
   
 0.441
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.