STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTA1Actin alpha 1, skeletal muscle. (377 aa)    
Predicted Functional Partners:
actl6a
Actin-like 6A; Belongs to the actin family.
    
0.927
dctn2
Dynactin 2 (p50).
   
 0.921
actr10
Actin related protein 10; Belongs to the actin family.
    
0.916
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.909
LOC103354955
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.907
tpm3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.907
LOC103365216
Tropomyosin 4a; Belongs to the tropomyosin family.
   
 0.907
LOC103374405
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.907
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.903
dctn4
Dynactin 4.
   
 0.902
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.