STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf7ipActivating transcription factor 7 interacting protein. (914 aa)    
Predicted Functional Partners:
setdb2
Uncharacterized protein.
   
 0.925
ENSSPAP00000016193
DUF5604 domain-containing protein.
   
 0.925
ENSSPAP00000016234
SET domain-containing protein.
   
 0.925
LOC103375558
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.921
C1QC
Complement C1q C chain.
   
 0.711
ENSSPAP00000016296
DUF4062 domain-containing protein.
    
 0.588
LOC103370190
Ubiquitin-like domain-containing protein.
    
 0.584
sumo2
Rad60-SLD domain-containing protein.
    
 0.584
LOC103353782
Ubiquitin-like domain-containing protein.
    
 0.584
LOC103354886
Small ubiquitin-related modifier.
    
 0.584
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.