STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103369702Si:ch211-11n16.2. (610 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
    
 0.985
ENSSPAP00000031427
Uncharacterized protein.
    
 0.985
ENSSPAP00000031428
Uncharacterized protein.
    
 0.985
rps27a
Ribosomal protein S27a.
    
  0.932
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.925
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.925
LOC103357286
Zinc finger, FYVE domain containing 1.
  
  
 
0.900
ZFYVE1
Uncharacterized protein.
  
  
 
0.900
uevld
UEV and lactate/malate dehyrogenase domains.
    
 0.873
tsg101
Tumor susceptibility 101a.
    
 0.856
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.