STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000018308WH2 domain-containing protein. (134 aa)    
Predicted Functional Partners:
LOC103370764
WASP like actin nucleation promoting factor b.
   
 0.925
was
Uncharacterized protein.
   
 0.925
LOC103363001
WASP like actin nucleation promoting factor a.
   
0.925
ENSSPAP00000018333
Uncharacterized protein.
 
      0.882
grb2
Growth factor receptor-bound protein 2b.
    
 0.870
LOC103364620
Sb:cb649.
  
 
0.859
nck2
Cytoplasmic protein.
    
 0.808
nck1
Cytoplasmic protein.
    
 0.808
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.698
LOC103372064
Cell division cycle 42.
   
 0.671
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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