STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360128Apolipoprotein A-IV a. (254 aa)    
Predicted Functional Partners:
apoe
Apolipoprotein Eb.
  
 
 
0.631
tonsl
Tonsoku-like, DNA repair protein.
   
  0.625
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.617
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.617
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.610
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
  0.610
LOC103360420
Macrophage stimulating 1 receptor a.
    
  0.610
mst1r
Macrophage stimulating 1 receptor b.
    
  0.610
ENSSPAP00000017432
Uncharacterized protein.
     
 0.606
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.605
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.