STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srxn1Sulfiredoxin. (146 aa)    
Predicted Functional Partners:
prdx1
Peroxiredoxin 1.
   
 0.968
prdx2
Peroxiredoxin 2.
   
 0.968
prdx3
Peroxiredoxin 3.
   
 0.944
prdx4
Peroxiredoxin 4.
   
 0.944
dennd10
DENN domain containing 10.
   
 0.932
PRDX6
Peroxiredoxin 6.
   
 0.917
prdx6
Peroxiredoxin 6.
   
 0.917
nfe2l2
Nuclear factor, erythroid 2-like 2a.
     
 0.649
txn
Thioredoxin; Belongs to the thioredoxin family.
   
 
 0.635
ENSSPAP00000004797
NDK domain-containing protein.
   
 
 0.595
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.