STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimregUncharacterized protein. (288 aa)    
Predicted Functional Partners:
cdca3
Si:ch211-69g19.2.
   
  
 0.748
cdc20
Cell division cycle 20 homolog.
   
 
 0.740
LOC103374293
Baculoviral IAP repeat containing 5a.
   
  
 0.669
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.616
nuf2
UF2 component of NDC80 kinetochore complex.
   
  
 0.611
bub1
Uncharacterized protein.
   
  
 0.576
tdrd7
Tudor domain containing 7 a.
    
   0.539
LOC103364796
Tudor domain containing 7 b.
    
   0.539
LOC103368463
Baculoviral IAP repeat containing 5b.
   
  
 0.538
cdca8
Cell division cycle associated 8.
   
  
 0.530
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.