STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo2Roundabout, axon guidance receptor, homolog 2 (Drosophila). (1353 aa)    
Predicted Functional Partners:
LOC103374376
Slit homolog 3 (Drosophila).
   
 0.803
LOC103365343
LRRNT domain-containing protein.
   
 0.803
SLIT1
Slit guidance ligand 1.
   
 0.802
slit1
Uncharacterized protein.
   
 0.802
ENSSPAP00000017356
Uncharacterized protein.
   
 0.802
slit2
Slit homolog 2 (Drosophila).
   
 0.802
LOC103365094
LRRNT domain-containing protein.
   
 0.774
ENSSPAP00000024034
Nyctalopin.
   
 0.774
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.698
LOC103360608
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.687
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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