STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc4h2Zinc finger, C4H2 domain containing. (224 aa)    
Predicted Functional Partners:
LOC103363915
Ring finger protein 220a.
    
 
 0.554
RNF220
Uncharacterized protein.
    
 
 0.554
ENSSPAP00000030811
Ring finger protein 220b.
    
 
 0.554
mogs
Mannosyl-oligosaccharide glucosidase.
      
 0.493
rlim
Ring finger protein, LIM domain interacting.
    
 
 0.467
ighmbp2
Immunoglobulin mu DNA binding protein 2.
      
 0.451
RAB39B
RAB39B, member RAS oncogene family.
      
 0.424
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
 0.412
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.