STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nphs1NPHS1 adhesion molecule, nephrin. (1151 aa)    
Predicted Functional Partners:
kirrel1
Kirre like nephrin family adhesion molecule 1a.
   
0.971
kirrel2
Kirre like nephrin family adhesion molecule 3, like.
   
0.971
KIRREL3
Kirre like nephrin family adhesion molecule 3.
   
0.971
LOC103373289
Uncharacterized protein.
   
0.971
nck2
Cytoplasmic protein.
    
 0.848
nck1
Cytoplasmic protein.
    
 0.848
sh3kbp1
SH3-domain kinase binding protein 1.
    
 0.822
sh3d21
SH3 domain containing 21.
    
 0.822
cd2ap
CD2-associated protein.
    
 0.822
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.809
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.