STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhf1Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
micu2
Mitochondrial calcium uptake 2.
   
 0.597
micu1
Mitochondrial calcium uptake 1.
   
 0.597
rab4a
RAB4a, member RAS oncogene family.
    
 0.589
rab4b
RAB4B, member RAS oncogene family.
    
 0.589
ENSSPAP00000009639
Uncharacterized protein.
     
 0.512
LOC103353962
Uncharacterized protein.
     
 0.512
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.506
pbk
PDZ binding kinase.
    
 0.497
ror1
Receptor tyrosine kinase-like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.497
ENSSPAP00000009012
Protein kinase domain-containing protein.
    
 0.497
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.