LOC103364743 protein (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103364743

Neurocalcin delta a. (193 aa)

Predicted Functional Partners:

LOC103363669

0.767

CASK

0.767

ENSSPAP00000029812

0.767

LOC103369594

0.703

pi4kb

0.703

myo3b

0.657

myo3a

0.657

LOC103369054

0.646

LOC103366803

0.646

LOC103369319

0.646

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASK	ENSSPAP00000029812	ENSSPAP00000023992	ENSSPAP00000029812	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Guanylate kinase-like domain-containing protein.	0.836
CASK	LOC103363669	ENSSPAP00000023992	ENSSPAP00000022573	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Uncharacterized protein.	0.837
CASK	LOC103364743	ENSSPAP00000023992	ENSSPAP00000019080	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Neurocalcin delta a.	0.767
CASK	LOC103366803	ENSSPAP00000023992	ENSSPAP00000013494	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Serine/threonine-protein phosphatase.	0.652
CASK	LOC103369054	ENSSPAP00000023992	ENSSPAP00000011608	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Serine/threonine-protein phosphatase.	0.652
CASK	LOC103369319	ENSSPAP00000023992	ENSSPAP00000023949	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Serine/threonine-protein phosphatase.	0.652
CASK	myo3a	ENSSPAP00000023992	ENSSPAP00000013487	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.690
CASK	myo3b	ENSSPAP00000023992	ENSSPAP00000007939	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.690
ENSSPAP00000029812	CASK	ENSSPAP00000029812	ENSSPAP00000023992	Guanylate kinase-like domain-containing protein.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.836
ENSSPAP00000029812	LOC103363669	ENSSPAP00000029812	ENSSPAP00000022573	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.981
ENSSPAP00000029812	LOC103364743	ENSSPAP00000029812	ENSSPAP00000019080	Guanylate kinase-like domain-containing protein.	Neurocalcin delta a.	0.767
ENSSPAP00000029812	LOC103366803	ENSSPAP00000029812	ENSSPAP00000013494	Guanylate kinase-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.652
ENSSPAP00000029812	LOC103369054	ENSSPAP00000029812	ENSSPAP00000011608	Guanylate kinase-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.652
ENSSPAP00000029812	LOC103369319	ENSSPAP00000029812	ENSSPAP00000023949	Guanylate kinase-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.652
ENSSPAP00000029812	myo3a	ENSSPAP00000029812	ENSSPAP00000013487	Guanylate kinase-like domain-containing protein.	Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.690
ENSSPAP00000029812	myo3b	ENSSPAP00000029812	ENSSPAP00000007939	Guanylate kinase-like domain-containing protein.	Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.690
LOC103363669	CASK	ENSSPAP00000022573	ENSSPAP00000023992	Uncharacterized protein.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.837
LOC103363669	ENSSPAP00000029812	ENSSPAP00000022573	ENSSPAP00000029812	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.981
LOC103363669	LOC103364743	ENSSPAP00000022573	ENSSPAP00000019080	Uncharacterized protein.	Neurocalcin delta a.	0.767
LOC103363669	LOC103366803	ENSSPAP00000022573	ENSSPAP00000013494	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.652