STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jam3Junctional adhesion molecule 3a. (333 aa)    
Predicted Functional Partners:
jam2
Junctional adhesion molecule 2a.
    
0.968
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.946
ENSSPAP00000011020
Par3_HAL_N_term domain-containing protein.
    
 0.937
LOC103371882
Par-3 family cell polarity regulator alpha, b.
    
 0.937
LOC103373890
Si:dkey-32n7.4; Belongs to the integrin alpha chain family.
    
 0.929
itgb2
Integrin beta.
   
 
 0.915
LOC103357005
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.910
ENSSPAP00000008721
Junctional adhesion molecule 2b.
     
0.901
PARD3
Par-3 family cell polarity regulator.
    
 0.900
LOC103357892
Junctional adhesion molecule 3b.
  
  
 
0.899
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.