STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373665Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
hspe1
Heat shock 10 protein 1; Belongs to the GroES chaperonin family.
     
 0.559
fblim1
Filamin binding LIM protein 1.
    
   0.545
umps
Uridine monophosphate synthetase.
    
  0.514
mocs1
Molybdenum cofactor synthesis 1.
     
 0.505
cutc
CutC copper transporter homolog (E. coli).
      
 0.504
ccs
Copper chaperone for superoxide dismutase.
     
 0.482
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.480
dus3l
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
     
 0.423
washc4
WASH complex subunit 4.
      
 0.418
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.