STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl21Ribosomal protein L21. (160 aa)    
Predicted Functional Partners:
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
rps28
Ribosomal protein S28.
   
 
 0.999
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rpl10
Ribosomal protein L10.
  
 0.999
rps10
Ribosomal protein S10.
   
 
 0.999
rplp1
Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.999
rpl32
Ribosomal protein L32.
   
 0.999
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.