STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdrd7Tudor domain containing 7 a. (1142 aa)    
Predicted Functional Partners:
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.812
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.801
ALPK1
Alpha kinase 1.
   
    0.675
tdrd9
Tudor domain containing 9.
  
 0.657
ENSSPAP00000007597
Tudor domain containing 12.
   
 0.642
helz2
C3H1-type domain-containing protein.
  
 0.622
LOC103356046
Mov10 RISC complex RNA helicase a.
   
 0.603
LOC103360971
Moloney leukemia virus 10b, tandem duplicate 1.
   
 0.603
mov10l1
Uncharacterized protein.
   
 0.603
uprt
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
    
 0.566
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.