STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366926Ig-like domain-containing protein. (242 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.962
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.910
ENSSPAP00000019468
MHC_II_alpha domain-containing protein.
   
 
 0.879
LOC103370472
Ig-like domain-containing protein.
   
 
0.879
ENSSPAP00000024499
MHC_II_beta domain-containing protein.
  
  0.831
ENSSPAP00000003550
MHC_II_beta domain-containing protein.
  
  0.826
LOC103366925
Ig-like domain-containing protein.
 
 
0.820
cd247
Uncharacterized protein.
   
 
 0.809
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.809
LOC103370478
Ig-like domain-containing protein.
 
 
 
0.800
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.