STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxt2Nuclear transport factor 2-like export factor 2. (143 aa)    
Predicted Functional Partners:
nxf1
Zgc:153681.
    
 0.999
ranbp2
RAN binding protein 2.
   
 0.990
NUP214
Nucleoporin 214.
    
 0.889
rae1
Ribonucleic acid export 1.
   
 
 0.856
gle1
GLE1 RNA export mediator.
    
 0.828
nup98
Nucleoporin 98.
     
 0.828
ranbp1
RAN binding protein 1.
   
 0.813
NUP62
Nucleoporin 62.
    
 0.808
ALYREF
Aly/REF export factor.
   
 0.806
ddx39a
Uncharacterized protein.
   
 
 0.785
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.