STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc119bUnc-119 homolog 1. (247 aa)    
Predicted Functional Partners:
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.802
LOC103368297
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.793
LOC103367836
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.793
nphp3
Nephronophthisis 3.
    
 0.777
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
 0.771
LOC103354384
ADP ribosylation factor like GTPase 3, like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.746
ENSSPAP00000003858
Tubulin folding cofactor C.
     
 0.694
LOC103368325
Kinesin light chain 3.
    
 0.652
klc4
Kinesin light chain 4.
    
 0.652
klc1
Kinesin light chain 1a.
    
 0.652
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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