STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKClock circadian regulator a. (852 aa)    
Predicted Functional Partners:
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
0.873
LOC103372986
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
0.873
LOC103372094
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
0.873
ENSSPAP00000026501
Uncharacterized protein.
   
0.873
LOC103358259
Cryptochrome circadian regulator 3a.
    
 0.866
LOC103366709
Period circadian clock 2.
    
0.826
per3
Period circadian clock 3.
    
0.826
PER2
Period circadian regulator 2.
    
0.826
per1
Period circadian clock 1b.
    
0.826
LOC103375950
Si:ch1073-390k14.1.
    
 0.814
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.