STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375503Premelanosome protein a. (793 aa)    
Predicted Functional Partners:
TYR
Tyrosinase.
   
  
 0.812
gart
Phosphoribosylglycinamide formyltransferase.
   
  
 0.645
tyrp1
Tyrosinase related protein 1.
   
  
 0.588
LOC103353170
Tyrosinase-related protein 1b.
   
  
 0.588
dct
Dopachrome tautomerase.
   
  
 0.512
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.505
tyr
Tyrosinase.
   
  
 0.477
LOC103356410
CD8a molecule.
      
 0.416
slc45a2
Solute carrier family 45 member 2.
   
  
 0.410
slc45a1
Solute carrier family 45 member 1.
   
  
 0.402
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.