Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103353391 | LOC103366473 | ENSSPAP00000014013 | ENSSPAP00000020537 | Si:dkey-93h22.8. | Nuclear receptor subfamily 2, group F, member 2. | 0.595 |
| LOC103353391 | med14 | ENSSPAP00000014013 | ENSSPAP00000011027 | Si:dkey-93h22.8. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.402 |
| LOC103366473 | LOC103353391 | ENSSPAP00000020537 | ENSSPAP00000014013 | Nuclear receptor subfamily 2, group F, member 2. | Si:dkey-93h22.8. | 0.595 |
| LOC103366473 | hsp90b1 | ENSSPAP00000020537 | ENSSPAP00000006230 | Nuclear receptor subfamily 2, group F, member 2. | Heat shock protein 90, beta (grp94), member 1. | 0.652 |
| LOC103366473 | med1 | ENSSPAP00000020537 | ENSSPAP00000028174 | Nuclear receptor subfamily 2, group F, member 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.699 |
| LOC103366473 | med14 | ENSSPAP00000020537 | ENSSPAP00000011027 | Nuclear receptor subfamily 2, group F, member 2. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.605 |
| LOC103366473 | ncor1 | ENSSPAP00000020537 | ENSSPAP00000003425 | Nuclear receptor subfamily 2, group F, member 2. | Nuclear receptor corepressor 1. | 0.709 |
| LOC103366473 | ncor2 | ENSSPAP00000020537 | ENSSPAP00000020711 | Nuclear receptor subfamily 2, group F, member 2. | Nuclear receptor corepressor 2. | 0.709 |
| LOC103366473 | ppargc1a | ENSSPAP00000020537 | ENSSPAP00000031370 | Nuclear receptor subfamily 2, group F, member 2. | Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. | 0.612 |
| LOC103366473 | pprc1 | ENSSPAP00000020537 | ENSSPAP00000003527 | Nuclear receptor subfamily 2, group F, member 2. | PPARG related coactivator 1. | 0.595 |
| LOC103366473 | rbm22 | ENSSPAP00000020537 | ENSSPAP00000000489 | Nuclear receptor subfamily 2, group F, member 2. | RNA binding motif protein 22. | 0.595 |
| LOC103366473 | rpl9 | ENSSPAP00000020537 | ENSSPAP00000027427 | Nuclear receptor subfamily 2, group F, member 2. | Ribosomal protein L9. | 0.604 |
| hsp90b1 | LOC103366473 | ENSSPAP00000006230 | ENSSPAP00000020537 | Heat shock protein 90, beta (grp94), member 1. | Nuclear receptor subfamily 2, group F, member 2. | 0.652 |
| med1 | LOC103366473 | ENSSPAP00000028174 | ENSSPAP00000020537 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2, group F, member 2. | 0.699 |
| med1 | med14 | ENSSPAP00000028174 | ENSSPAP00000011027 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
| med1 | ncor1 | ENSSPAP00000028174 | ENSSPAP00000003425 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.714 |
| med1 | ncor2 | ENSSPAP00000028174 | ENSSPAP00000020711 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.714 |
| med1 | ppargc1a | ENSSPAP00000028174 | ENSSPAP00000031370 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. | 0.570 |
| med14 | LOC103353391 | ENSSPAP00000011027 | ENSSPAP00000014013 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Si:dkey-93h22.8. | 0.402 |
| med14 | LOC103366473 | ENSSPAP00000011027 | ENSSPAP00000020537 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2, group F, member 2. | 0.605 |
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