STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
meis2Meis homeobox 2a. (478 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
    
 0.892
tshz3
Teashirt zinc finger homeobox 3b.
   
 0.837
LOC103363989
Teashirt zinc finger homeobox 3a.
   
 0.837
LOC103364900
Pre-B-cell leukemia homeobox 1a.
   
0.779
ENSSPAP00000007462
PBC domain-containing protein.
   
 0.779
pbx1
Homeobox domain-containing protein.
   
0.779
pbx3
Homeobox domain-containing protein.
   
0.779
LOC103372009
Homeobox domain-containing protein.
   
0.779
LOC103356852
Pre-B-cell leukemia homeobox 2.
   
0.779
pbx4
Pre-B-cell leukemia transcription factor 4.
   
0.779
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.