STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000020719Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
ENSSPAP00000020729
Uncharacterized protein.
 
      0.771
LOC103371145
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.657
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.645
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.627
LOC103371221
Intersectin 2b.
    
 0.612
ENSSPAP00000031427
Uncharacterized protein.
    
 0.612
ENSSPAP00000031428
Uncharacterized protein.
    
 0.612
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.611
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.604
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.580
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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