STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000020746Microtubule actin crosslinking factor 1b. (217 aa)    
Predicted Functional Partners:
ENSSPAP00000025860
Uncharacterized protein.
 
   
 0.926
LOC103360598
Uncharacterized protein.
 
  
   0.908
ENSSPAP00000007460
SH3 domain-containing protein.
 
    
 0.904
ENSSPAP00000013914
SH3 domain-containing protein.
 
    
 0.904
LOC103359623
Plectin b.
 
    
 0.735
ACTN4
Actinin alpha 4.
 
  
   0.707
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.644
actn2
Actinin, alpha 2b.
 
  
   0.628
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.627
LOC103371221
Intersectin 2b.
    
 0.612
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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