STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103365207Scaffold attachment factor B. (751 aa)    
Predicted Functional Partners:
tra2a
Transformer 2 alpha homolog.
  
 0.892
tra2b
Transformer 2 beta homolog.
  
 0.891
LOC103365142
Uncharacterized protein.
   
 0.889
LOC103362657
Serine and arginine rich splicing factor 1a.
   
 0.889
LOC103353788
RRM domain-containing protein.
  
 0.888
srsf9
Serine and arginine rich splicing factor 9.
   
 0.885
LOC103363951
RRM domain-containing protein.
  
 
 0.802
srsf2
RRM domain-containing protein.
  
 
 0.798
rbmx
RNA binding motif protein X-linked.
  
 0.783
ENSSPAP00000010779
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 0.751
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.