STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357417Oxysterol-binding protein; Belongs to the OSBP family. (964 aa)    
Predicted Functional Partners:
LOC103366613
Uncharacterized protein.
    
 0.782
LOC103359881
RAB7a, member RAS oncogene family.
    
 0.782
mospd2
Motile sperm domain containing 2.
    
 
 0.687
rilp
Rab interacting lysosomal protein.
   
 0.628
LOC103369789
Uncharacterized protein.
   
 0.582
LOC103363196
Uncharacterized protein.
   
 0.582
garem1
GRB2 associated, regulator of MAPK1.
    
  0.466
rasef
RAS and EF-hand domain containing.
    
  0.466
rab28
Uncharacterized protein.
    
  0.466
LOC103366693
RAB40c, member RAS oncogene family.
    
  0.466
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.