STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356347Si:dkey-202g17.3. (397 aa)    
Predicted Functional Partners:
LOC103353494
Si:ch73-352p4.8.
  
 0.949
slc7a11
Solute carrier family 7 member 11.
  
 0.949
slc7a5
Solute carrier family 7 member 5.
  
 0.940
LOC103353002
Uncharacterized protein.
  
 0.928
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.876
LOC103358814
Uncharacterized protein.
  
 0.829
slc7a7
Solute carrier family 7 member 7.
  
 0.829
LOC103376020
Si:dkeyp-120h9.1.
  
 0.829
LOC103355407
Solute carrier family 7 member 6.
  
 0.829
LOC103357197
Solute carrier family 7 member 10b.
  
 0.825
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.