STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362474Pyrophosphatase (inorganic) 1a. (323 aa)    
Predicted Functional Partners:
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.938
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.930
lhpp
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
     
 0.927
atp5f1c
ATP synthase subunit gamma.
  
 
 0.923
ATP4A
Sodium/potassium-transporting ATPase subunit alpha.
    
 0.903
LOC103361132
Pyrophosphatase (inorganic) 2.
  
  
 
0.899
LOC103355134
Pyrophosphatase (inorganic) 1b.
  
  
 
0.899
atp6v0b
ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.
  
 
 0.899
ATP4B
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
 
  0.898
atp5mc1
ATP synthase membrane subunit c locus 1; Belongs to the ATPase C chain family.
  
 
 0.884
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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