STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR91WD repeat domain 91. (524 aa)    
Predicted Functional Partners:
wdr81
WD repeat domain 81.
   
 
 0.952
becn1
Beclin 1, autophagy related.
    
 
 0.512
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
   
 
0.470
lyst
Lysosomal trafficking regulator.
   
 
 0.470
ENSSPAP00000028233
Uncharacterized protein.
   
 
 0.470
WDFY4
WDFY family member 4.
   
 
 0.470
ccdc93
Coiled-coil domain containing 93.
      
 0.418
ascc3
Activating signal cointegrator 1 complex subunit 3.
      
 0.416
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.405
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.