STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000021191LAM_G_DOMAIN domain-containing protein. (531 aa)    
Predicted Functional Partners:
col9a1
Collagen, type IX, alpha 1b.
 
 
 
 0.649
col9a3
Collagen, type IX, alpha 3.
 
   
 0.624
C1QC
Complement C1q C chain.
   
  0.614
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family.
    
 0.606
LOC103370387
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family.
    
 0.606
LOC103368589
Protein disulfide-isomerase.
   
  0.590
ENSSPAP00000016296
DUF4062 domain-containing protein.
    
 0.588
p4ha3
Prolyl 4-hydroxylase, alpha polypeptide III.
    
 0.573
p4hb
Protein disulfide-isomerase.
   
  0.561
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.557
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.