STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375511Si:dkey-202e22.2. (558 aa)    
Predicted Functional Partners:
unc5a
Unc-5 netrin receptor A.
     
 0.752
NEO1
Neogenin 1.
   
 0.718
ENSSPAP00000024425
Ig-like domain-containing protein.
   
 0.718
ENSSPAP00000026176
DCC netrin 1 receptor.
   
 0.718
LOC103358820
Immunoglobulin superfamily, DCC subclass, member 4.
   
 0.684
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.654
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.652
itgb4
Integrin beta.
    
 0.648
ENSSPAP00000005790
Protein kinase domain-containing protein.
   
 0.645
LOC103366020
Protein kinase domain-containing protein.
    
 0.640
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.