STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptges3Prostaglandin E synthase 3b (cytosolic). (159 aa)    
Predicted Functional Partners:
ppp5c
Serine/threonine-protein phosphatase.
    
 0.973
LOC103369948
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.966
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.966
LOC103369947
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.966
stip1
Stress-induced phosphoprotein 1.
   
 0.966
NR3C1
Nuclear receptor subfamily 3 group C member 1.
   
 0.951
LOC103359143
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
   
 0.951
ppid
Peptidylprolyl isomerase D.
   
 0.946
ptges
Prostaglandin E synthase.
     
 0.946
ppig
Peptidylprolyl isomerase G (cyclophilin G).
   
 0.943
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.