STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356917Erb-b2 receptor tyrosine kinase 3b. (1454 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.971
egf
Epidermal growth factor.
   
 0.949
LOC103372188
Neuregulin 1.
    
 0.935
ENSSPAP00000023641
Transforming growth factor, alpha.
    
 0.935
SHC3
SHC adaptor protein 3.
    
 0.933
ENSSPAP00000024106
Uncharacterized protein.
    
 0.933
LOC103356783
Neuregulin 2a.
    
 0.931
nrg2
Neuregulin 2b.
    
 0.931
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.928
ENSSPAP00000026412
Uncharacterized protein.
    
 0.928
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.