STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xbp1X-box binding protein 1. (265 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.959
LOC103359183
Endoplasmic reticulum to nucleus signaling 2.
    
 0.954
ern1
Endoplasmic reticulum to nucleus signaling 1.
    
 0.954
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.942
tbpl1
TBP-like 1.
   
 
 0.855
atf6
Activating transcription factor 6.
    
 0.851
rpl8
Ribosomal protein L8.
    
  0.841
atf6b
BZIP domain-containing protein.
    
 0.827
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.824
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.809
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.