STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efcc1EF-hand and coiled-coil domain containing 1. (641 aa)    
Predicted Functional Partners:
acbd5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
   
    0.621
LOC103360660
Acyl-CoA binding domain containing 4.
   
    0.621
ENSSPAP00000027842
ACB domain-containing protein.
   
    0.621
ENSSPAP00000003353
Uncharacterized protein.
      
 0.513
polr2k
Uncharacterized protein.
      
 0.442
acbd6
Acyl-CoA binding domain containing 6.
   
    0.426
DBI
Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).
   
    0.426
eci2
Enoyl-CoA delta isomerase 2.
   
    0.426
LOC103358243
Zgc:163014.
   
    0.426
acbd7
Acyl-CoA binding domain containing 7.
   
    0.426
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.