STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000021712Chemokine (C motif) receptor 1b, duplicate 1; Belongs to the G-protein coupled receptor 1 family. (361 aa)    
Predicted Functional Partners:
ENSSPAP00000012794
C-C motif chemokine.
    
 0.877
LOC103360119
C-C motif chemokine.
    
 0.865
LOC103369144
SCY domain-containing protein.
   
 0.859
ENSSPAP00000023262
Uncharacterized protein.
    
 0.844
ENSSPAP00000031224
SCY domain-containing protein.
    
  0.839
ENSSPAP00000022040
Chemokine (C-C motif) ligand 25b.
    
 0.835
LOC103360590
SCY domain-containing protein.
   
 
 0.831
cxcl12
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.830
LOC103364318
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.830
ENSSPAP00000000984
Uncharacterized protein.
   
 
 0.824
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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