STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erc2ELKS/RAB6-interacting/CAST family member 2. (973 aa)    
Predicted Functional Partners:
ENSSPAP00000017331
C2 domain-containing protein.
    
 
 0.827
ENSSPAP00000017360
PDZ domain-containing protein.
    
 
 0.827
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.827
ENSSPAP00000024374
C2 domain-containing protein.
    
 
 0.502
ENSSPAP00000024489
Regulating synaptic membrane exocytosis 1a.
    
 
 0.502
LOC103358375
Uncharacterized protein.
    
 
 0.493
ppfia2
PTPRF interacting protein alpha 2.
    
 
 0.493
ppfia4
PTPRF interacting protein alpha 4.
    
 
 0.493
LOC103368186
PTPRF interacting protein alpha 3.
    
 
 0.493
ppfia1
PTPRF interacting protein alpha 1.
    
 
 0.493
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.