STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efcab1EF-hand calcium binding domain 1. (215 aa)    
Predicted Functional Partners:
armc4
Armadillo repeat containing 4.
  
 
 0.906
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.866
armc3
Armadillo repeat containing 3.
   
 
 0.860
LOC103363382
Coiled-coil domain containing 114.
    
 
 0.855
LOC103360577
Uncharacterized protein.
    
 0.843
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.834
morn5
MORN repeat containing 5.
   
   0.823
LOC103359497
Tetratricopeptide repeat domain 25.
   
 0.822
ENSSPAP00000014288
TPR_REGION domain-containing protein.
   
 0.822
tekt3
Tektin 3.
   
 
 0.820
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.