STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grwd1Glutamate-rich WD repeat containing 1. (447 aa)    
Predicted Functional Partners:
noc2l
Uncharacterized protein.
   
 
 0.983
wdr36
WD repeat domain 36.
   
 
 0.975
rsl1d1
Ribosomal L1 domain containing 1.
   
 
 0.972
pwp1
PWP1 homolog, endonuclein.
   
  
0.972
LOC103365965
PWP2 small subunit processome component.
   
  
 0.970
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
 
 0.967
ddx18
RNA helicase.
   
 
 0.967
rpf2
Ribosome production factor 2 homolog.
   
  
 0.961
bysl
Bystin-like.
   
  
 0.960
rrp1
Uncharacterized protein.
   
   0.959
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.