STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103359725Cytochrome b561 family, member D2. (220 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
ints3
Integrator complex subunit 3.
   
   0.703
ints5
Integrator complex subunit 5.
   
   0.702
ints1
Integrator complex subunit 1.
    
   0.700
bard1
BRCA1 associated RING domain 1.
    
 0.616
YTHDC2
YTH domain containing 2.
    
  0.579
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.576
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.573
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
  0.572
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.564
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.