STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfap2bTranscription factor AP-2 beta. (445 aa)    
Predicted Functional Partners:
wwox
WW domain containing oxidoreductase.
    
 0.746
yeats4
YEATS domain containing 4.
    
 0.710
LOC103369821
SAP domain-containing protein.
    
 0.697
KCTD1
Potassium channel tetramerization domain containing 1.
   
 0.679
kctd15
BTB domain-containing protein.
   
 0.679
ENSSPAP00000010587
DUF3504 domain-containing protein.
   
 0.679
LOC103354698
BTB domain-containing protein.
   
 0.679
LOC103363036
Nucleophosmin 1a.
   
  0.679
KCTD15
Potassium channel tetramerization domain containing 15a.
   
 0.679
LOC103363949
Nucleophosmin 1b.
   
  0.678
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.