STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc8aKelch domain containing 8A. (363 aa)    
Predicted Functional Partners:
pex7
Peroxisomal biogenesis factor 7.
    
   0.720
KLHL7
Kelch like family member 7.
  
 
  0.630
LOC103374658
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.578
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.578
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.578
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.578
txndc9
Thioredoxin domain containing 9.
    
   0.553
ivns1abp
Influenza virus NS1A binding protein a.
  
 
 
0.507
tmem71
Uncharacterized protein.
      
 0.495
ENSSPAP00000019751
Uncharacterized protein.
  
 
  0.495
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.