STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360160RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (381 aa)    
Predicted Functional Partners:
LOC103360059
RNA binding motif protein 24b.
  
 
 0.783
RBM38
RNA binding motif protein 38.
  
 
 0.769
LOC103363951
RRM domain-containing protein.
  
  
 0.716
srsf2
RRM domain-containing protein.
  
  
 0.699
rbm24
RNA binding motif protein 24a.
  
 
0.673
ENSSPAP00000001643
Uncharacterized protein.
  
 
 0.665
ENSSPAP00000028120
annotation not available
  
 
 0.665
LOC103373045
RRM domain-containing protein.
  
 
0.656
LOC103375096
Uncharacterized protein.
  
 
 0.652
elavl1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.629
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (30%) [HD]