ENSSPAP00000022023 protein (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSPAP00000022023

Uncharacterized protein. (132 aa)

Predicted Functional Partners:

LOC103375201

0.858

gnb5

0.416

nipsnap2

0.402

nipsnap1

0.402

LOC103362275

0.402

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000022023	LOC103362275	ENSSPAP00000022023	ENSSPAP00000011341	Uncharacterized protein.	NIPSNAP domain-containing protein.	0.402
ENSSPAP00000022023	LOC103375201	ENSSPAP00000022023	ENSSPAP00000004967	Uncharacterized protein.	Uncharacterized protein.	0.858
ENSSPAP00000022023	gnb5	ENSSPAP00000022023	ENSSPAP00000030677	Uncharacterized protein.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.416
ENSSPAP00000022023	nipsnap1	ENSSPAP00000022023	ENSSPAP00000009893	Uncharacterized protein.	Nipsnap homolog 1 (C. elegans).	0.402
ENSSPAP00000022023	nipsnap2	ENSSPAP00000022023	ENSSPAP00000006226	Uncharacterized protein.	Nipsnap homolog 2.	0.402
LOC103362275	ENSSPAP00000022023	ENSSPAP00000011341	ENSSPAP00000022023	NIPSNAP domain-containing protein.	Uncharacterized protein.	0.402
LOC103362275	LOC103375201	ENSSPAP00000011341	ENSSPAP00000004967	NIPSNAP domain-containing protein.	Uncharacterized protein.	0.402
LOC103375201	ENSSPAP00000022023	ENSSPAP00000004967	ENSSPAP00000022023	Uncharacterized protein.	Uncharacterized protein.	0.858
LOC103375201	LOC103362275	ENSSPAP00000004967	ENSSPAP00000011341	Uncharacterized protein.	NIPSNAP domain-containing protein.	0.402
LOC103375201	gnb5	ENSSPAP00000004967	ENSSPAP00000030677	Uncharacterized protein.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.416
LOC103375201	nipsnap1	ENSSPAP00000004967	ENSSPAP00000009893	Uncharacterized protein.	Nipsnap homolog 1 (C. elegans).	0.402
LOC103375201	nipsnap2	ENSSPAP00000004967	ENSSPAP00000006226	Uncharacterized protein.	Nipsnap homolog 2.	0.402
gnb5	ENSSPAP00000022023	ENSSPAP00000030677	ENSSPAP00000022023	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	Uncharacterized protein.	0.416
gnb5	LOC103375201	ENSSPAP00000030677	ENSSPAP00000004967	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	Uncharacterized protein.	0.416
nipsnap1	ENSSPAP00000022023	ENSSPAP00000009893	ENSSPAP00000022023	Nipsnap homolog 1 (C. elegans).	Uncharacterized protein.	0.402
nipsnap1	LOC103375201	ENSSPAP00000009893	ENSSPAP00000004967	Nipsnap homolog 1 (C. elegans).	Uncharacterized protein.	0.402
nipsnap2	ENSSPAP00000022023	ENSSPAP00000006226	ENSSPAP00000022023	Nipsnap homolog 2.	Uncharacterized protein.	0.402
nipsnap2	LOC103375201	ENSSPAP00000006226	ENSSPAP00000004967	Nipsnap homolog 2.	Uncharacterized protein.	0.402