STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bace2Beta-secretase 2; Belongs to the peptidase A1 family. (509 aa)    
Predicted Functional Partners:
LOC103352860
Amyloid beta (A4) precursor protein b.
    
 0.790
APP
Amyloid beta precursor protein.
    
 0.790
LOC103369625
Uncharacterized protein.
    
 0.768
LOC103355945
Uncharacterized protein.
    
 0.768
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.768
ENSSPAP00000023042
Si:ch73-335l21.4.
    
 0.731
rtn1
Reticulon.
   
 0.716
LOC103356348
Reticulon.
   
 0.716
rtn4
Reticulon.
   
 0.716
LOC103359706
Reticulon.
   
 0.716
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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