rnf40 protein (Stegastes partitus) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

rnf40

E3 ubiquitin protein ligase. (1003 aa)

Predicted Functional Partners:

leo1

0.994

LOC103352853

0.923

ENSSPAP00000008959

0.923

ube2a

0.923

ube2b

0.923

cdc73

0.908

paf1

0.894

ctr9

0.852

wac

0.849

LOC103354334

0.849

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000008959	LOC103354334	ENSSPAP00000008959	ENSSPAP00000027416	Uncharacterized protein.	WW domain-containing protein.	0.604
ENSSPAP00000008959	cdc73	ENSSPAP00000008959	ENSSPAP00000004030	Uncharacterized protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.761
ENSSPAP00000008959	ctr9	ENSSPAP00000008959	ENSSPAP00000016526	Uncharacterized protein.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.759
ENSSPAP00000008959	leo1	ENSSPAP00000008959	ENSSPAP00000011518	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.989
ENSSPAP00000008959	paf1	ENSSPAP00000008959	ENSSPAP00000029087	Uncharacterized protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.736
ENSSPAP00000008959	rnf40	ENSSPAP00000008959	ENSSPAP00000022045	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.923
ENSSPAP00000008959	wac	ENSSPAP00000008959	ENSSPAP00000021169	Uncharacterized protein.	WW domain containing adaptor with coiled-coil a.	0.604
LOC103352853	LOC103354334	ENSSPAP00000007280	ENSSPAP00000027416	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	WW domain-containing protein.	0.604
LOC103352853	cdc73	ENSSPAP00000007280	ENSSPAP00000004030	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.761
LOC103352853	ctr9	ENSSPAP00000007280	ENSSPAP00000016526	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.759
LOC103352853	leo1	ENSSPAP00000007280	ENSSPAP00000011518	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.989
LOC103352853	paf1	ENSSPAP00000007280	ENSSPAP00000029087	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.736
LOC103352853	rnf40	ENSSPAP00000007280	ENSSPAP00000022045	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin protein ligase.	0.923
LOC103352853	wac	ENSSPAP00000007280	ENSSPAP00000021169	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	WW domain containing adaptor with coiled-coil a.	0.604
LOC103354334	ENSSPAP00000008959	ENSSPAP00000027416	ENSSPAP00000008959	WW domain-containing protein.	Uncharacterized protein.	0.604
LOC103354334	LOC103352853	ENSSPAP00000027416	ENSSPAP00000007280	WW domain-containing protein.	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.604
LOC103354334	cdc73	ENSSPAP00000027416	ENSSPAP00000004030	WW domain-containing protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.675
LOC103354334	ctr9	ENSSPAP00000027416	ENSSPAP00000016526	WW domain-containing protein.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.723
LOC103354334	leo1	ENSSPAP00000027416	ENSSPAP00000011518	WW domain-containing protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.981
LOC103354334	paf1	ENSSPAP00000027416	ENSSPAP00000029087	WW domain-containing protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.696